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Is there any specific reason why GATK Bundle only has dbSNP138 since. As I am aware ReorderSAM works over sam files, and dbSNP141 is VCF file. Any hints on what may be causing the error, as I downloaded the file.
in Ask the GATK team
I've tried to connect via FTP and download dbsnp_138.hg19.vcf, but I cannot.
I've also tried with
I've also tried with
but they said me the username is incorrect.
Any other solution?
Any other solution?
![Vcf Vcf](https://s3.manualzz.com/store/data/032987816_1-d05c37642b5f96d90d51195eb0068949.png)
thanks!
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Answers
- @IgorL
Hi,Can you try again? It seems to be working now. Sometimes issues arise when too many users are trying to gain access.-Sheila - this one cannot be used for Muteck2 for the lack of 'AF' information
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- @Sheila
Hi,
Is it working now?I always meet Connection timed out when I tried to download it. - Cambridge MAMember, Administrator, Broadie, ModeratoradminHi @ZandikarI am able to access this folder: ftp://ftp.broadinstitute.org/bundle/hg19/ . Must be a connection issue on your end.